Well, I seem to have solved it. I had figured it had something to do with a scene and you verified it, but I had to trace which switch was causing it. I had tried to reset the switches before, but I did it one more time. I left the power off to them a little bit longer, then pushed the button a little bit longer after the beep stopped. I did it to three of my switches after tracing the numbers. It now seems to work properly.
Thanks for the help.